BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F07SP1|AL428585
(703 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1306 1012 0.0
>3x_Contig1306
Length = 6696
Score = 1012 bits (491), Expect = 0.0
Identities = 627/699 (89%)
Strand = Plus / Plus
Query: 3 ttcggttatcatgaacaataccaagatttttgtagagagttcgggttttgtacagttgga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5184 ttcggttatcatgaacaataccaagatttttgtagagagttcgggttttgtacagttgga 5243
Query: 63 accgttcatcaggatgtcggtatcctctccgcaagtsaaagtcttctcattgatatcgga 122
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 5244 accgttcatcaggatgtcggtatcctctccgcaagtgaaagttttctcattgatatcgga 5303
Query: 123 ttatsacatcagggctgtggcatcamaccggtacgttcaattcaacggtggtaatmagtc 182
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 5304 ttatgacatcagggctgtggcatcaaaccggtacgttcaattcaacggtggtaataagtc 5363
Query: 183 caagamgcaaacsattttcattggtgagacasggtctttcamgacccaatcggcttcama 242
||||| |||||| |||||||||||||||||| ||||||| | |||||||||||||||| |
Sbjct: 5364 caagaagcaaacgattttcattggtgagacagggtctttgaagacccaatcggcttcaaa 5423
Query: 243 ctcatacccaamacacatttccmgtttstcaactacgtyccattcactatycyysacaty 302
||||||||||| ||| ||||| |||| | |||||||| ||||||||||| | | ||
Sbjct: 5424 ctcatacccaaaacagatttctagtttgttaactacgttccattcactattcttgaaatt 5483
Query: 303 ctyccccgacgatgccatacayacytgccattccccaccgtyagayttcctgacacagca 362
| |||||||||||||||| | || ||| ||| |||||| ||| ||| ||||||||||
Sbjct: 5484 gttccccgacgatgccatagatacttgcaatttttcaccgttagatttcttgacacagca 5543
Query: 363 atggmagtcggctatcccaagggtatgtctcgcyccactatcggcyctccccgaagagtt 422
|||| ||| ||||||||||||||||||| ||| ||||||| || || |||||||||
Sbjct: 5544 atggaagttggctatcccaagggtatgtttcgatccactattggttcttttcgaagagtt 5603
Query: 423 tgtcccamagccattacmtcaacamatctyggccaagcctttcmcctcsggtctcgtyac 482
||| ||| ||| ||||| |||||| |||| |||||||||||| ||| |||||||| ||
Sbjct: 5604 tgttccaaagcgattacatcaacaaatcttggccaagcctttgatctcgggtctcgttac 5663
Query: 483 tgacataatcacgttgactagmaccatggctsccagattgccttccggttacgatacaga 542
||| ||||||||||||||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 5664 tgagataatcacgttgactagaaccatgggtgctagattgccttccggttacgatacaga 5723
Query: 543 magccatcttytggmaagatgggtcgcggataatggtgaaaacaactacccctcgttgtt 602
||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5724 aagcgatcttttggaaagatgggtcgcggataatggtgaaaacaactacccctcgttgtt 5783
Query: 603 gtaccatttcsmacatagatctgcaccactagatatagatttctcattgctacaaccgat 662
|||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 5784 gtaccatttcgaacatagatctgcaccactagatatagatttgttattgctacaaccgat 5843
Query: 663 cttactggcggatgattttccgataaagacaccctattt 701
||||||||||||||||||| |||||||||||||||||||
Sbjct: 5844 cttactggcggatgattttacgataaagacaccctattt 5882
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1990
Number of Sequences: 1807
Number of extensions: 1990
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 703
length of database: 10,358,551
effective HSP length: 16
effective length of query: 687
effective length of database: 10,329,639
effective search space: 7096461993
effective search space used: 7096461993
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.4 bits)